Boundary-Aware Network for Medical Image Segmentation

Shishuai Hu
Northwestern Polytechnical University
Zehui Liao
Northwestern Polytechnical University
Jiangpeng Zhang
Northwestern Polytechnical University
Yong Xia
Northwestern Polytechnical University

Code [GitHub]



Overview

Figure 1: Example of Boundary-Aware Network for Medical Image Segmentation.


Abstract

Although numerous deep learning models have achieved remarkable success in many medical image segmentation tasks, accurate segmentation of organs or tumors remains challenging, due to the varying sizes of organs and tumors and the ambiguous boundaries among them. In this paper, we propose a boundary-aware network (BA-Net) for medical image segmentation. This model contains a shared encoder, a boundary decoder, and a segmentation decoder. The multi-scale deep supervision strategy is adopted on both decoders, which can alleviate the issues caused by variable target sizes. The boundary probability maps produced by the boundary decoder at each scale are used as attention to enhance the segmentation feature maps. We evaluated the BA-Net on the Abdominal Multi-Organ Segmentation (AMOS) Challenge dataset and achieved an average Dice score of 89.29$\%$ for multi-organ segmentation on CT scans and an average Dice score of 71.92$\%$ on MRI scans. Also, we evaluated the BA-Net on the Kidney PArsing (KiPA) Challenge dataset and achieved an average Dice score of 89.65$\%$ for kidney structure segmentation on CTA scans using 4-fold cross-validation. The results demonstrate the effectiveness of the BA-Net.

Highlights

(1) Combination of region segmentation and boundary detection.
We combine the continuity-based region segmentation with discontinuity-based boundary detection and use the detected boundary information as that spatial attention to assist the segmentation decoder at multiple scales.

(2) Consistent constraint.
We introduce a consistency loss to ensure that the outputs of the segmentation and boundary decoders are consistent.

(3) Competitive results.
We present extensive experiments, which demonstrate the effectiveness of our BA-Net model against the state-of-the-art in medical image segmentation benchmarks.

Related Publications

Citation

If this work is helpful for your research, please consider citing:
                    
@inproceedings{hu2020boundary,
  title={Boundary-aware network for kidney tumor segmentation},
  author={Hu, Shishuai and Zhang, Jianpeng and Xia, Yong},
  booktitle={International Workshop on Machine Learning in Medical Imaging},
  pages={189--198},
  year={2020},
  organization={Springer}
}
@incollection{hu2023boundary,
  title={Boundary-Aware Network for Kidney Parsing},
  author={Hu, Shishuai and Liao, Zehui and Ye, Yiwen and Xia, Yong},
  booktitle={Lesion Segmentation in Surgical and Diagnostic Applications: MICCAI 2022 Challenges, CuRIOUS 2022, KiPA 2022 and MELA 2022, Held in Conjunction with MICCAI 2022, Singapore, September 18--22, 2022, Proceedings},
  pages={9--17},
  year={2023},
  publisher={Springer}
}
@misc{https://doi.org/10.48550/arxiv.2208.13774,
  doi = {10.48550/ARXIV.2208.13774},
  url = {https://arxiv.org/abs/2208.13774},
  author = {Hu, Shishuai and Liao, Zehui and Xia, Yong},
  title = {Boundary-Aware Network for Abdominal Multi-Organ Segmentation},
  publisher = {arXiv},
  year = {2022},
}
                    
                    
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